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  • Top cofit genes for PP_3299 from Pseudomonas putida KT2440

    Outer membrane lipoprotein
    SEED: Outer membrane component of tripartite multidrug resistance system

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1937 putative helicase no 0.22
    2 PP_4742 Type I restriction-modification system, S subunit no 0.22
    3 PP_1948 Benzaldehyde dehydrogenase no 0.22
    4 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.22
    5 PP_1940 Methyl-accepting chemotaxis transducer no 0.21
    6 PP_1287 Glycosyltransferase alg8 no 0.21
    7 PP_1791 putative Aldolase/synthase no 0.21
    8 PP_0506 putative ABC efflux transporter, permease protein no 0.21
    9 PP_3790 diaminopimelate epimerase no 0.20
    10 PP_1357 conserved protein of unknown function no 0.20
    11 PP_1955 Cytochrome P450 family protein no 0.20
    12 PP_3787 conserved protein of unknown function no 0.19
    13 PP_1945 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase no 0.18
    14 PP_4684 conserved protein of unknown function with kinase-like domain no 0.18
    15 PP_1931 conserved protein of unknown function no 0.18
    16 PP_1923 conserved protein of unknown function no 0.18
    17 PP_2714 Sensor histidine kinase no 0.18
    18 PP_1943 formyltetrahydrofolate deformylase no 0.18
    19 PP_4463 Carbon-nitrogen hydrolase family protein no 0.18
    20 PP_1349 ATP:cob(I)alamin adenosyltransferase no 0.18

    Or look for negative cofitness