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  • Top cofit genes for PP_3296 from Pseudomonas putida KT2440

    putative transporter
    SEED: YeeE/YedE family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3536 conserved protein of unknown function no 0.19
    2 PP_1741 choline / betaine / carnitine ABC transporter - substrate binding protein BetX 0.24 0.18
    3 PP_3047 conserved protein of unknown function no 0.18
    4 PP_2077 diaminopimelate decarboxylase no 0.18
    5 PP_3304 Multidrug resistance transporter, Bcr/CflA family no 0.17
    6 PP_5726 conserved protein of unknown function no 0.17
    7 PP_1308 methionine gamma-lyase no 0.16
    8 PP_3305 Membrane protein, TerC family no 0.16
    9 PP_0851 Type IV pili biogenesis protein PilF no 0.16
    10 PP_2272 conserved protein of unknown function no 0.16
    11 PP_5337 LysR family transcriptional regulator no 0.16
    12 PP_5536 conserved protein of unknown function with RHS repeat-associated core domain no 0.16
    13 PP_1300 putative amino acid ABC transporter - ATP-binding subunit no 0.16
    14 PP_0642 conserved membrane protein of unknown function no 0.16
    15 PP_2445 conserved membrane protein of unknown function no 0.16
    16 PP_5380 copper resistance protein A no 0.15
    17 PP_1306 Pyocin S-type Killer domain protein no 0.15
    18 PP_1909 putative septum formation protein 0.67 0.15
    19 PP_4946 sodium/L-proline transporter no 0.15
    20 PP_2567 Hydrolase, alpha/beta fold family no 0.15

    Or look for negative cofitness