Top cofit genes for PP_3281 from Pseudomonas putida KT2440

hydroxyphenylacetyl-CoA thioesterase
SEED: Phenylacetic acid degradation protein PaaD, thioesterase
KEGG: phenylacetic acid degradation protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3270		oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase	0.61	0.52
2	PP_3279		phenylacetate-CoA ligase	0.78	0.49
3	PP_3282		3-hydroxyadipyl-CoA dehydrogenase	0.58	0.49
4	PP_3272		acetate permease	no	0.48
5	PP_3276		ring 1,2-phenylacetyl-CoA epoxidase beta subunit	0.53	0.42
6	PP_3284		enoyl-CoA hydratase-isomerase	0.56	0.41
7	PP_3274		ring 1,2-phenylacetyl-CoA epoxidase, reductase subunit	0.66	0.40
8	PP_3273		conserved protein of unknown function	no	0.37
9	PP_3280		3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase	0.81	0.37
10	PP_3283		1,2-epoxyphenylacetyl-CoA isomerase	0.72	0.35
11	PP_3285		detoxifying thioesterase of the phenylacetate degradation pathway	0.41	0.35
12	PP_3278		ring 1,2-phenylacetyl-CoA epoxidase alpha subunit	0.58	0.35
13	PP_3277		ring 1,2-phenylacetyl-CoA epoxidase regulatory subunit	0.38	0.33
14	PP_3271		phenylacetic acid-specific porin	no	0.30
15	PP_3494		conserved exported protein of unknown function	no	0.28
16	PP_3493		Transcriptional regulator, LysR family	no	0.27
17	PP_0178		putative efflux pump	no	0.16
18	PP_0192		putative FKBP-type 25 kDa peptidyl-prolyl cis-trans isomerase	no	0.14
19	PP_3785		conserved protein of unknown function	no	0.14
20	PP_3338		putative cytochrome bd-type quinol oxidase	no	0.14

Or look for negative cofitness