Top cofit genes for PP_3279 from Pseudomonas putida KT2440

phenylacetate-CoA ligase
SEED: Phenylacetate-coenzyme A ligase (EC 6.2.1.30) PaaF
KEGG: phenylacetate-CoA ligase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3272		acetate permease	no	0.80
2	PP_3282		3-hydroxyadipyl-CoA dehydrogenase	0.82	0.80
3	PP_3270		oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase	0.83	0.78
4	PP_3274		ring 1,2-phenylacetyl-CoA epoxidase, reductase subunit	0.70	0.72
5	PP_3283		1,2-epoxyphenylacetyl-CoA isomerase	0.93	0.69
6	PP_3276		ring 1,2-phenylacetyl-CoA epoxidase beta subunit	0.69	0.63
7	PP_3285		detoxifying thioesterase of the phenylacetate degradation pathway	0.66	0.63
8	PP_3273		conserved protein of unknown function	no	0.60
9	PP_3278		ring 1,2-phenylacetyl-CoA epoxidase alpha subunit	0.71	0.60
10	PP_3284		enoyl-CoA hydratase-isomerase	0.78	0.60
11	PP_3280		3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase	0.93	0.58
12	PP_3277		ring 1,2-phenylacetyl-CoA epoxidase regulatory subunit	0.69	0.57
13	PP_3271		phenylacetic acid-specific porin	no	0.56
14	PP_3281		hydroxyphenylacetyl-CoA thioesterase	0.78	0.49
15	PP_3493		Transcriptional regulator, LysR family	0.41	0.46
16	PP_3494		conserved exported protein of unknown function	no	0.46
17	PP_0178		putative efflux pump	no	0.20
18	PP_0179		putative efflux transporter	no	0.17
19	PP_2356		putative Phytochrome family protein	no	0.16
20	PP_2025		Exonuclease SbcD	no	0.14

Or look for negative cofitness