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  • Top cofit genes for PP_3278 from Pseudomonas putida KT2440

    ring 1,2-phenylacetyl-CoA epoxidase alpha subunit
    SEED: Phenylacetate-CoA oxygenase, PaaG subunit
    KEGG: phenylacetic acid degradation protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3282 3-hydroxyadipyl-CoA dehydrogenase 0.58 0.64
    2 PP_3272 acetate permease no 0.64
    3 PP_3270 oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase 0.64 0.62
    4 PP_3279 phenylacetate-CoA ligase 0.71 0.60
    5 PP_3274 ring 1,2-phenylacetyl-CoA epoxidase, reductase subunit 0.95 0.58
    6 PP_3277 ring 1,2-phenylacetyl-CoA epoxidase regulatory subunit 0.95 0.54
    7 PP_3283 1,2-epoxyphenylacetyl-CoA isomerase 0.71 0.54
    8 PP_3276 ring 1,2-phenylacetyl-CoA epoxidase beta subunit 0.98 0.53
    9 PP_3285 detoxifying thioesterase of the phenylacetate degradation pathway 0.50 0.53
    10 PP_3284 enoyl-CoA hydratase-isomerase 0.47 0.49
    11 PP_3271 phenylacetic acid-specific porin no 0.43
    12 PP_3280 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase 0.68 0.42
    13 PP_3494 conserved exported protein of unknown function no 0.41
    14 PP_3273 conserved protein of unknown function no 0.40
    15 PP_3493 Transcriptional regulator, LysR family no 0.35
    16 PP_3281 hydroxyphenylacetyl-CoA thioesterase 0.58 0.35
    17 PP_0179 putative efflux transporter no 0.17
    18 PP_0176 putative efflux transporter no 0.15
    19 PP_4826 Precorrin-3B C17-methyltransferase no 0.14
    20 PP_2001 O-succinylhomoserine sulfhydrylase no 0.14

    Or look for negative cofitness