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  • Top cofit genes for PP_3273 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Putative membrane protein, clustering with ActP PaaL

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3270 oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase no 0.62
    2 PP_3279 phenylacetate-CoA ligase no 0.60
    3 PP_3282 3-hydroxyadipyl-CoA dehydrogenase no 0.60
    4 PP_3274 ring 1,2-phenylacetyl-CoA epoxidase, reductase subunit no 0.59
    5 PP_3272 acetate permease no 0.57
    6 PP_3283 1,2-epoxyphenylacetyl-CoA isomerase no 0.55
    7 PP_3284 enoyl-CoA hydratase-isomerase no 0.48
    8 PP_3285 detoxifying thioesterase of the phenylacetate degradation pathway no 0.47
    9 PP_3277 ring 1,2-phenylacetyl-CoA epoxidase regulatory subunit no 0.46
    10 PP_3271 phenylacetic acid-specific porin no 0.42
    11 PP_3276 ring 1,2-phenylacetyl-CoA epoxidase beta subunit no 0.42
    12 PP_3278 ring 1,2-phenylacetyl-CoA epoxidase alpha subunit no 0.40
    13 PP_3281 hydroxyphenylacetyl-CoA thioesterase no 0.37
    14 PP_3494 conserved exported protein of unknown function no 0.36
    15 PP_3280 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase no 0.36
    16 PP_3493 Transcriptional regulator, LysR family no 0.31
    17 PP_0887 Sensor histidine kinase no 0.20
    18 PP_3719 Putrescine-binding periplasmic protein no 0.18
    19 PP_4342 flagellar synthesis regulator, putative ATPase no 0.18
    20 PP_5580 protein of unknown function no 0.17

    Or look for negative cofitness