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  • Top cofit genes for PP_3267 from Pseudomonas putida KT2440

    putative Clp protease
    SEED: Protease subunit of ATP-dependent Clp proteases

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3037 C4-type zinc finger protein, DksA/TraR family no 0.25
    2 PP_0760 conserved membrane protein of unknown function no 0.21
    3 PP_2878 conserved protein of unknown function no 0.21
    4 PP_4994 conserved protein of unknown function no 0.20
    5 PP_4642 Cyclic diguanosine monophosphate-binding protein no 0.20
    6 PP_5310 junction-specific ATP-dependent DNA helicase no 0.20
    7 PP_3835 Sensory box histidine kinase no 0.20
    8 PP_1049 putative protein secretion protein for export no 0.20
    9 PP_3607 conserved membrane protein of unknown function no 0.19
    10 PP_2103 conserved protein of unknown function no 0.18
    11 PP_2720 conserved protein of unknown function no 0.18
    12 PP_5606 conserved exported protein of unknown function with YVTN beta-propeller repeat no 0.18
    13 PP_3294 Universal stress protein family no 0.18
    14 PP_0994 putative RNA polymerase sigma factor no 0.18
    15 PP_4055 Glycogen debranching enzyme no 0.18
    16 PP_1733 membrane ATPase of the MinC-MinD-MinE system no 0.18
    17 PP_2732 conserved protein of unknown function no 0.18
    18 PP_4211 outer membrane pyoverdine efflux protein 0.67 0.18
    19 PP_2109 conserved protein of unknown function 0.21 0.18
    20 PP_4389 Flagellar basal-body rod modification protein FlgD no 0.17

    Or look for negative cofitness