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  • Top cofit genes for PP_3255 from Pseudomonas putida KT2440

    non-homologous end joining protein
    SEED: Ku domain protein
    KEGG: DNA end-binding protein Ku

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4964 D-erythrose 4-phosphate dehydrogenase no 0.18
    2 PP_3260 DNA ligase D 0.25 0.17
    3 PP_3549 multidrug efflux transport system - membrane fusion protein 0.84 0.17
    4 PP_2593 Ferric siderophore ABC transporter, permease protein no 0.16
    5 PP_5272 conserved protein of unknown function no 0.15
    6 PP_5639 conserved exported protein of unknown function no 0.15
    7 PP_1388 Drug resistance transporter, EmrB/QacA family no 0.14
    8 PP_3634 putative acetyltransferase, GNAT family no 0.14
    9 PP_2231 putative permease of the drug/metabolite transporter (DMT) superfamily no 0.14
    10 PP_5122 Oxidoreductase, GMC family no 0.14
    11 PP_3490 manganese-oxidizing multicopper oxidase no 0.14
    12 PP_4828 Precorrin-8X methylmutase 0.34 0.14
    13 PP_3342 nickel ABC transporter periplasmic binding protein no 0.14
    14 PP_4874 50S ribosomal protein L9 no 0.14
    15 PP_2573 conserved protein of unknown function no 0.14
    16 PP_0026 putative cobalt/cadmium/zinc exporter 0.33 0.14
    17 PP_1555 putative Phage integrase no 0.13
    18 PP_2458 ribokinase 0.14 0.13
    19 PP_1758 putative sulfurtransferase containing rhodanese-like domain no 0.13
    20 PP_1306 Pyocin S-type Killer domain protein no 0.13

    Or look for negative cofitness