Top cofit genes for PP_3253 from Pseudomonas putida KT2440

Carboxylate-amine ligase PP_3253
SEED: FIG074102: hypothetical protein
KEGG: carboxylate-amine ligase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3790		diaminopimelate epimerase	no	0.17
2	PP_1063		DNA-binding transcriptional regulator, homocysteine-binding	no	0.16
3	PP_2348		Sensor histidine kinase	0.23	0.16
4	PP_2907		DNA-binding response regulator	no	0.16
5	PP_0891		conserved exported protein of unknown function	no	0.16
6	PP_3787		conserved protein of unknown function	no	0.16
7	PP_2839		conserved protein of unknown function	no	0.15
8	PP_3443		putative glyceraldehyde-3-phosphate dehydrogenase	no	0.15
9	PP_3989		DNA-cytosine methyltransferase	no	0.15
10	PP_3729		Periplasmic amino acid-binding protein-related protein	no	0.15
11	PP_3784		conserved protein of unknown function	no	0.15
12	PP_3992		xanthine permease	0.64	0.15
13	PP_4922		Phosphomethylpyrimidine synthase	no	0.15
14	PP_5248		putative hydrolase	no	0.15
15	PP_2109		conserved protein of unknown function	no	0.15
16	PP_4595		putative LRP-like transcriptional regulator	no	0.14
17	PP_3471		conserved protein of unknown function	no	0.14
18	PP_2439		peroxiredoxin, alkylhydroperoxide reductase - small subunit	no	0.14
19	PP_0274		putative transcriptional regulator containing HTH domain	no	0.14
20	PP_3788		putative Non-ribosomal peptide synthetase	no	0.14

Or look for negative cofitness