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Cofit
Protein
Homologs
Top cofit genes for PP_3250 from
Pseudomonas putida KT2440
putative Transporter
SEED: putative inner membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_4749
Amino acid ABC transporter, permease protein
no
0.19
2
PP
_4483
histidine lysine / arginine / ornithine ABC transporter - ATP binding subunit
0.54
0.18
3
PP
_3907
conserved protein of unknown function
no
0.17
4
PP
_0796
conserved protein of unknown function
no
0.17
5
PP
_4337
chemotaxis response regulator protein-glutamate methylesterase of group 1 operon
0.27
0.17
6
PP
_0619
Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein
no
0.17
7
PP
_4946
sodium/L-proline transporter
no
0.17
8
PP
_5180
spermidine/putrescine ABC transporter - periplasmic subunit
no
0.16
9
PP
_4905
Flagellar motor rotation protein
no
0.16
10
PP
_3062
putative Pyocin R2_PP, tail length determination protein
no
0.16
11
PP
_4084
conserved protein of unknown function
0.22
0.16
12
PP
_3722
Alanine racemase
no
0.16
13
PP
_2496
conserved protein of unknown function
no
0.16
14
PP
_2689
putative Endoribonuclease
no
0.16
15
PP
_3574
conserved protein of unknown function
no
0.16
16
PP
_1372
conserved protein of unknown function
0.45
0.16
17
PP
_1109
Transcriptional regulator, GntR family
no
0.15
18
PP
_1111
putative Synthetase
no
0.15
19
PP
_2849
urease accessory protein
no
0.15
20
PP
_4632
dihydrofolate reductase / dihydromonapterin reductase
no
0.15
Or look for
negative cofitness