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  • Top cofit genes for PP_3247 from Pseudomonas putida KT2440

    Transporter, bile acid/Na+ symporter family
    SEED: Sodium-dependent transporter
    KEGG: bile acid:Na+ symporter, BASS family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3256 Glycosyl transferase, group 2 family protein no 0.22
    2 PP_2557 Sensory box protein no 0.18
    3 PP_4330 putative toxin-related protein no 0.17
    4 PP_4329 FlhB domain protein no 0.17
    5 PP_5251 putative Transporter no 0.17
    6 PP_4010 DNA replication inhibitor 0.38 0.16
    7 PP_3047 conserved protein of unknown function no 0.16
    8 PP_1999 membrane protein required for colicin V production no 0.16
    9 PP_3287 transcriptional regulator with 4Fe-4S cluster; Crp/Fnr family 0.28 0.16
    10 PP_0207 putative Nitrate ABC transporter, periplasmic nitrate-binding protein no 0.16
    11 PP_2750 putative Branched-chain amino acid ABC transporter, permease protein no 0.16
    12 PP_2038 long-chain-fatty-acid--CoA ligase no 0.16
    13 PP_1707 D-isomer specific 2-hydroxyacid dehydrogenase family protein 0.53 0.15
    14 PP_4586 conserved exported protein of unknown function no 0.15
    15 PP_1862 conserved membrane protein of unknown function 0.33 0.15
    16 PP_1781 putative O-acyltransferase no 0.15
    17 PP_0584 Methyl-accepting chemotaxis transducer no 0.15
    18 PP_3192 conserved protein of unknown function no 0.15
    19 PP_2818 Multidrug efflux RND transporter MexD 0.19 0.15
    20 PP_3037 C4-type zinc finger protein, DksA/TraR family no 0.15

    Or look for negative cofitness