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  • Top cofit genes for PP_3238 from Pseudomonas putida KT2440

    putative Transcriptional regulator PyrR
    SEED: phosphoribosyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0080 conserved protein of unknown function no 0.23
    2 PP_0674 ADP/ATP ratio sensor and inhibitor of translation no 0.21
    3 PP_2210 LysR family transcriptional regulator no 0.20
    4 PP_1894 glutathione S-transferase reducing arsenate to arsenite no 0.19
    5 PP_5157 conserved exported protein of unknown function no 0.18
    6 PP_0369 putative diguanylate cyclase no 0.18
    7 PP_3619 conserved protein of unknown function no 0.18
    8 PP_3920 putative Phage integrase no 0.18
    9 PP_2889 putative Transmembrane regulator PrtR no 0.18
    10 PP_0994 putative RNA polymerase sigma factor no 0.17
    11 PP_3693 putative Transcriptional regulator MvaT, P16 subunit no 0.17
    12 PP_3001 CAIB/BAIF family protein no 0.17
    13 PP_0663 Transcriptional regulator, AsnC family no 0.17
    14 PP_3781 Oxygen-independent Coproporphyrinogen III oxidase family protein no 0.17
    15 PP_2634 putative Cellulose synthase no 0.17
    16 PP_3409 putative Cobalamin biosynthesis protein cobE no 0.17
    17 PP_2025 Exonuclease SbcD no 0.17
    18 PP_0051 putative sigma-54 dependent transcriptional regulator no 0.16
    19 PP_4879 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB no 0.16
    20 PP_0086 conserved protein of unknown function no 0.16

    Or look for negative cofitness