Top cofit genes for PP_3231 from Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_2685		conserved protein of unknown function	no	0.17
2	PP_2415		putative acetyltransferase, GNAT family	no	0.15
3	PP_1352		UPF0234 protein PP_1352	no	0.15
4	PP_0496		Sodium/alanine symporter	0.59	0.15
5	PP_1451		conserved exported protein of unknown function	0.58	0.14
6	PP_3051		Pyocin R2_PP, tail spike protein	no	0.14
7	PP_4043		putative 6-phosphogluconate dehydrogenase, decarboxylating	no	0.14
8	PP_3483		putative Type II secretion system protein	no	0.14
9	PP_2989		Oxidoreductase, short chain dehydrogenase/reductase family	no	0.14
10	PP_2774		glycine betaine ABC transporter, ATPase/permease fusion protein	no	0.14
11	PP_4663		conserved transmembrane protein of unknown function	no	0.14
12	PP_5324		Response regulator	no	0.13
13	PP_2952		Transcriptional regulator, LysR family	no	0.13
14	PP_5048		two-component system DNA-binding transcriptional dual regulator GlnL/GlnG	no	0.13
15	PP_4985		16S rRNA m3U1498 methyltransferase	no	0.13
16	PP_0573		conserved protein of unknown function	no	0.13
17	PP_2107		conserved protein of unknown function	no	0.13
18	PP_2961		Transcriptional regulator, LysR family	no	0.13
19	PP_4558		Acetyltransferase, GNAT family	no	0.13
20	PP_5194		aminomethyltransferase	no	0.12

Or look for negative cofitness