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  • Top cofit genes for PP_3228 from Pseudomonas putida KT2440

    putative Periplasmic aliphatic sulfonate-binding protein
    SEED: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
    KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2258 Sensory box protein no 0.21
    2 PP_1987 Methlytransferase, UbiE/COQ5 family 0.24 0.20
    3 PP_0866 putative Transmembrane sensor no 0.19
    4 PP_2210 LysR family transcriptional regulator 0.55 0.19
    5 PP_3831 conserved protein of unknown function no 0.19
    6 PP_4611 RNA polymerase sigma-70 factor, ECF subfamily no 0.19
    7 PP_5229 conserved protein of unknown function 0.19 0.18
    8 PP_2832 galactose-binding protein regulator no 0.18
    9 PP_2025 Exonuclease SbcD no 0.18
    10 PP_2864 conserved protein of unknown function no 0.17
    11 PP_2121 putative Lipoprotein no 0.17
    12 PP_3360 conserved membrane protein of unknown function no 0.17
    13 PP_0170 ABC transporter, periplasmic binding protein no 0.17
    14 PP_2108 conserved protein of unknown function no 0.17
    15 PP_2070 Transcriptional regulator, AraC family 0.57 0.17
    16 PP_2641 Iron-sulfur cluster-binding protein no 0.17
    17 PP_2857 conserved exported protein of unknown function no 0.16
    18 PP_4676 methionine sulfoxide reductase catalytic subunit no 0.16
    19 PP_2458 ribokinase 0.67 0.16
    20 PP_0663 Transcriptional regulator, AsnC family no 0.16

    Or look for negative cofitness