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  • Top cofit genes for PP_3225 from Pseudomonas putida KT2440

    D-isomer specific 2-hydroxyacid dehydrogenase family protein
    SEED: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4785 conserved exported protein of unknown function no 0.26
    2 PP_3417 D-gluconate transporter 0.74 0.24
    3 PP_5639 conserved exported protein of unknown function no 0.23
    4 PP_0570 lipoprotein of unknown function no 0.23
    5 PP_0138 conserved membrane protein of unknown function no 0.23
    6 PP_5348 Transcriptional regulator, LysR family 0.74 0.22
    7 PP_5347 pyruvate carboxylase subunit A 0.75 0.22
    8 PP_4218 Lipase/esterase family protein no 0.21
    9 PP_5346 pyruvate carboxylase subunit B 0.76 0.21
    10 PP_5027 D-tyrosyl-tRNA(Tyr) deacylase no 0.21
    11 PP_1898 MotA/TolQ/ExbB proton channel family protein no 0.21
    12 PP_0363 8-amino-7-oxononanoate synthase no 0.21
    13 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase 0.70 0.20
    14 PP_1304 sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase no 0.20
    15 PP_3691 DNA helicase-related protein no 0.20
    16 PP_3095 Protein ClpV1 no 0.20
    17 PP_1015 mannose/glucose ABC transporter, glucose-binding periplasmic protein no 0.19
    18 PP_3419 Sigma-54 dependent transcriptional regulator/response regulator no 0.19
    19 PP_0365 Malonyl-[acyl-carrier protein] O-methyltransferase no 0.19
    20 PP_2044 conserved inner membrane protein of unknown function no 0.19

    Or look for negative cofitness