Top cofit genes for PP_3222 from Pseudomonas putida KT2440

ABC transporter, permease protein
SEED: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)
KEGG: peptide/nickel transport system permease protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3484		Response regulator receiver protein	no	0.20
2	PP_1253		Transcriptional regulator, ArsR family	no	0.18
3	PP_4250		cytochrome c oxidase subunit I, cbb3-type	no	0.17
4	PP_1059		Uncharacterized amino acid permease YtnA	no	0.16
5	PP_4158		sensor protein	no	0.16
6	PP_4337		chemotaxis response regulator protein-glutamate methylesterase of group 1 operon	no	0.16
7	PP_0104		Cytochrome c oxidase subunit 1	no	0.15
8	PP_4780		putative Acyl-CoA dehydrogenase	0.19	0.15
9	PP_0075		putative choline sulfate transporter	no	0.15
10	PP_1752		conserved protein of unknown function	no	0.15
11	PP_4336		flagellar motor rotation protein	no	0.15
12	PP_0823		Selenide, water dikinase	no	0.15
13	PP_0204		Transcriptional regulator, GntR family	no	0.15
14	PP_2925		malate:quinone oxidoreductase	no	0.15
15	PP_4335		flagellar motor protein	no	0.14
16	PP_0164		conserved protein of unknown function	no	0.14
17	PP_2645		magnesium transporter, ATP-dependent	no	0.14
18	PP_1751		methyltransferase/FAD-dependent oxidoreductase	0.44	0.14
19	PP_2028		conserved protein of unknown function containing tetratricopeptide (TPR) domain repeat	0.15	0.14
20	PP_2971		transposase	no	0.14

Or look for negative cofitness