Top cofit genes for PP_3221 from Pseudomonas putida KT2440

ABC transporter, permease protein
SEED: Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)
KEGG: peptide/nickel transport system permease protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3444		Glyoxalase family protein	no	0.17
2	PP_4157		two-component system DNA-binding response activator KdpE	no	0.16
3	PP_2956		Ribosomal protein S6 modification protein-related protein	no	0.16
4	PP_0435		Peptidase, M23/M37 family	no	0.15
5	PP_3589		serine:H+ symport permease, threonine-insensitive	no	0.15
6	PP_2130		putative Soluble lytic transglycosylase	no	0.15
7	PP_2572		conserved protein of unknown function	no	0.15
8	PP_2008		2,4-dienoyl-CoA reductase	no	0.15
9	PP_3888		conserved protein of unknown function	no	0.15
10	PP_1684		putative Transporter	no	0.14
11	PP_5701		conserved protein of unknown function	no	0.14
12	PP_5322		putative metal ion transporter	no	0.14
13	PP_3743		conserved exported protein of unknown function	no	0.14
14	PP_2896		conserved protein of unknown function	no	0.14
15	PP_5241		DNA-binding response regulator, LuxR family	no	0.14
16	PP_2734		Cyclopropane-fatty-acyl-phospholipid synthase	no	0.13
17	PP_4954		conserved membrane protein of unknown function	no	0.13
18	PP_3735		ABC transporter ATP-binding protein	no	0.13
19	PP_4470		putative transcriptional regulator (Arc domain-containing)	no	0.13
20	PP_3420		Sensor histidine kinase	no	0.13

Or look for negative cofitness