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  • Top cofit genes for PP_3209 from Pseudomonas putida KT2440

    Isoxanthopterin deaminase
    SEED: BOX elements
    KEGG: hydroxyatrazine ethylaminohydrolase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4342 flagellar synthesis regulator, putative ATPase no 0.30
    2 PP_2077 diaminopimelate decarboxylase no 0.29
    3 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 no 0.29
    4 PP_3073 3-hydroxybutyrate dehydrogenase no 0.28
    5 PP_1318 Cytochrome b no 0.28
    6 PP_0951 Ribosome hibernation promoting factor no 0.27
    7 PP_5502 ribosome modulation factor no 0.26
    8 PP_4261 cation-transporting P-type ATPase no 0.26
    9 PP_4250 cytochrome c oxidase subunit I, cbb3-type no 0.26
    10 PP_1317 Ubiquinol-cytochrome c reductase iron-sulfur subunit no 0.25
    11 PP_0218 Sensory box protein no 0.25
    12 PP_4375 flagellar chaperone, inhibits premature FliC assembly no 0.25
    13 PP_1623 RNA polymerase, sigma S (sigma 38) factor no 0.25
    14 PP_4343 Flagellar biosynthesis protein FlhF no 0.24
    15 PP_0397 protein kinase no 0.24
    16 PP_4337 chemotaxis response regulator protein-glutamate methylesterase of group 1 operon 0.31 0.24
    17 PP_0395 putative type IV piliation protein no 0.24
    18 PP_0396 conserved protein of unknown function no 0.23
    19 PP_0984 conserved membrane protein of unknown function no 0.23
    20 PP_1087 Outer membrane protein, OmpA family no 0.23

    Or look for negative cofitness