Top cofit genes for PP_3196 from Pseudomonas putida KT2440

Nodulation protein d1
SEED: Transcriptional regulator

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3722		Alanine racemase	no	0.19
2	PP_3050		conserved protein of unknown function	no	0.17
3	PP_1577		Phage tail tape meausure protein, lambda family	no	0.16
4	PP_2907		DNA-binding response regulator	no	0.16
5	PP_5209		conserved exported protein of unknown function	no	0.16
6	PP_0215		Response regulator	no	0.16
7	PP_2749		putative Branched-chain amino acid ABC transporter, permease protein	no	0.16
8	PP_2755		sulfur acquisition oxidoreductase, SfnB family	no	0.16
9	PP_1970		putative Lipoprotein	no	0.16
10	PP_5472		conserved exported protein of unknown function	no	0.15
11	PP_3201		BNR domain protein	no	0.15
12	PP_0665		putative glyceraldehyde-3-phosphate dehydrogenase	no	0.15
13	PP_4475		succinylglutamate desuccinylase	no	0.15
14	PP_4250		cytochrome c oxidase subunit I, cbb3-type	no	0.15
15	PP_3621		vanillin dehydrogenase, iorA-like component (from data)	no	0.15
16	PP_1576		putative Immunity protein	no	0.15
17	PP_4305		sulfate ABC transporter	no	0.15
18	PP_0715		Outer membrane efflux protein	no	0.15
19	PP_4057		conserved membrane protein of unknown function with autotransporter beta-domain	no	0.15
20	PP_4208		RNA polymerase sigma-70 factor, ECF subfamily	no	0.15

Or look for negative cofitness