Top cofit genes for PP_3181 from Pseudomonas putida KT2440

Site-specific recombinase, phage integrase family
SEED: Cointegrate resolution protein S

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_1655		23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	no	0.19
2	PP_2168		Transaldolase	no	0.18
3	PP_2996		conserved protein of unknown function	no	0.17
4	PP_1789		Hydrolase, haloacid dehalogenase-like family	no	0.16
5	PP_3662		conserved protein of unknown function	no	0.16
6	PP_4246		Periplasmic binding protein	no	0.16
7	PP_1656		ATP:GTP 3'-pyrophosphotransferase	no	0.16
8	PP_2973		diacylglycerol kinase	no	0.16
9	PP_2132		Universal stress protein	no	0.16
10	PP_4242		conserved protein of unknown function with Rhs repeat-associated core domain	no	0.15
11	PP_3383		gluconate 2-dehydrogenase flavoprotein subunit	no	0.15
12	PP_4924		Serine protease, subtilase family	no	0.15
13	PP_2943		putative Cytochrome c551 peroxidase	no	0.15
14	PP_4053		maltooligosyl trehalose synthase	no	0.15
15	PP_5473		putative transcriptional regulator, LuxR family	no	0.15
16	PP_5097		homoserine O-acetyltransferase	no	0.15
17	PP_1469		Thiol:disulfide interchange protein DsbC	no	0.15
18	PP_5098		methionine biosynthesis protein MetW	no	0.14
19	PP_5732		putative metal-binding protein	no	0.14
20	PP_0291		conserved protein of unknown function	no	0.14

Or look for negative cofitness