• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for PP_3179 from Pseudomonas putida KT2440

    Transcriptional regulator, LysR family
    SEED: Chromosome initiation inhibitor

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0066 Ribosomal RNA small subunit methyltransferase B no 0.32
    2 PP_1774 conserved exported protein of unknown function no 0.32
    3 PP_3769 conserved exported protein of unknown function no 0.32
    4 PP_1798 Outer membrane efflux protein no 0.28
    5 PP_1627 conserved protein of unknown function no 0.28
    6 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase no 0.27
    7 PP_4971 putative Outer membrane-bound lytic murein transglycolase A no 0.27
    8 PP_0540 conserved inner membrane protein no 0.27
    9 PP_4217 outer membrane ferripyoverdine receptor FpvA, TonB-dependent no 0.26
    10 PP_3627 conserved protein of unknown function no 0.26
    11 PP_1803 UDP-sugar epimerase no 0.26
    12 PP_5113 predicted Zn-dependent peptidases no 0.26
    13 PP_1777 phosphomannomutase no 0.26
    14 PP_1770 3-phosphoshikimate 1-carboxyvinyltransferase no 0.26
    15 PP_0405 conserved protein of unknown function no 0.26
    16 PP_5217 Polyphosphate kinase 0.39 0.25
    17 PP_t49 tRNA-Met no 0.25
    18 PP_1626 DNA mismatch repair protein MutS no 0.25
    19 PP_5283 periplasmic dipeptide transport protein 0.29 0.25
    20 PP_1764 Phosphoglycolate phosphatase 2 no 0.24

    Or look for negative cofitness