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  • Top cofit genes for PP_3175 from Pseudomonas putida KT2440

    putative Dioxygenase, ferredoxin reductase component
    SEED: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2248 putative transporter no 0.25
    2 PP_4768 Exonuclease no 0.23
    3 PP_4243 non-ribosomal peptide synthase (subunit of ferribactin synthase) no 0.22
    4 PP_4220 non-ribosomal peptide synthetase (subunit of ferribactin synthase) no 0.21
    5 PP_5603 putative FAD dependent oxidoreductase no 0.21
    6 PP_5571 conserved protein of unknown function no 0.21
    7 PP_4221 non-ribosomal peptide synthetase (subunit of ferribactin synthase) no 0.20
    8 PP_0331 conserved protein of unknown function no 0.20
    9 PP_4531 conserved exported protein of unknown function no 0.20
    10 PP_1051 Type II secretion pathway protein XcpV no 0.20
    11 PP_3955 permease no 0.20
    12 PP_4219 non-ribosomal peptide synthetase no 0.20
    13 PP_4845 putative Urea ABC transporter, ATP-binding protein no 0.19
    14 PP_4300 putative hydroxypyruvate reductase no 0.19
    15 PP_1072 Leucine-rich repeat domain protein no 0.19
    16 PP_2070 Transcriptional regulator, AraC family no 0.19
    17 PP_1391 Transcriptional regulator, LysR family no 0.18
    18 PP_2563 putative Antibiotic biosynthesis protein no 0.18
    19 PP_4246 Periplasmic binding protein no 0.18
    20 PP_2110 putative ribosomal large subunit pseudouridine synthase no 0.18

    Or look for negative cofitness