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  • Top cofit genes for PP_3170 from Pseudomonas putida KT2440

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1396 conserved protein of unknown function no 0.18
    2 PP_0205 putative Oxidoreductase no 0.16
    3 PP_2762 acyl-CoA dehydrogenase/oxidase family protein no 0.15
    4 PP_4775 conserved protein of unknown function no 0.15
    5 PP_1362 pyruvate kinase II no 0.15
    6 PP_4250 cytochrome c oxidase subunit I, cbb3-type no 0.15
    7 PP_3451 conserved exported protein of unknown function no 0.15
    8 PP_3625 Transporter, LysE family 0.34 0.14
    9 PP_2088 RNA polymerase sigma factor SigX no 0.14
    10 PP_4612 putative FecR protein no 0.14
    11 PP_5063 betaine aldehyde dehydrogenase, NAD-dependent no 0.14
    12 PP_4178 Dienelactone hydrolase family protein no 0.14
    13 PP_2104 conserved membrane protein of unknown function no 0.14
    14 PP_1898 MotA/TolQ/ExbB proton channel family protein no 0.14
    15 PP_0123 DNA polymerase I, 5 no 0.14
    16 PP_2844 Urease subunit beta 0.21 0.14
    17 PP_2943 putative Cytochrome c551 peroxidase no 0.14
    18 PP_0138 conserved membrane protein of unknown function 0.49 0.13
    19 PP_3056 putative Pyocin R2_PP, tail fiber protein no 0.13
    20 PP_3720 putative NAD(P)H quinone oxidoreductase no 0.13

    Or look for negative cofitness