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  • Top cofit genes for PP_3166 from Pseudomonas putida KT2440

    catechol 1,2-dioxygenase
    SEED: Catechol 1,2-dioxygenase (EC 1.13.11.1)
    KEGG: catechol 1,2-dioxygenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5486 conserved protein of unknown function no 0.25
    2 PP_5310 junction-specific ATP-dependent DNA helicase no 0.24
    3 PP_3350 conserved exported protein of unknown function no 0.24
    4 PP_2293 DNA maturase B no 0.23
    5 PP_4004 DNA translocase FtsK no 0.23
    6 PP_4836 conserved exported protein of unknown function no 0.22
    7 PP_1216 Holliday junction ATP-dependent DNA helicase RuvA no 0.22
    8 PP_2945 putative sensor histidine kinase/response regulator no 0.21
    9 PP_1907 Hydrolase, haloacid dehalogenase-like family no 0.21
    10 PP_4516 ATP-dependent DNA 3 no 0.21
    11 PP_t11 tRNA-Lys no 0.21
    12 PP_2933 GSH-dependent disulfide bond oxidoreductase no 0.21
    13 PP_3019 Carbon-nitrogen hydrolase family protein no 0.21
    14 PP_3011 conserved protein of unknown function no 0.20
    15 PP_3182 GGDEF domain protein no 0.20
    16 PP_2971 transposase no 0.20
    17 PP_1629 Protein RecA no 0.20
    18 PP_4682 conserved protein of unknown function containing tetratricopeptide repeat domain no 0.20
    19 PP_1145 RNA polymerase-associated protein RapA no 0.19
    20 PP_3483 putative Type II secretion system protein no 0.19

    Or look for negative cofitness