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  • Top cofit genes for PP_3154 from Pseudomonas putida KT2440

    lipid A 3-O-deacylase
    SEED: Lipid A 3-O-deacylase
    KEGG: lipid A 3-O-deacylase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3474 putative Curli fiber protein CsgE no 0.37
    2 PP_1385 Probable efflux pump membrane transporter TtgB no 0.36
    3 PP_1386 Probable efflux pump periplasmic linker TtgA no 0.36
    4 PP_0961 toluene tolerance protein no 0.35
    5 PP_2163 VacJ lipoprotein no 0.34
    6 PP_1384 Probable efflux pump outer membrane protein TtgC no 0.32
    7 PP_0346 putative Heptose kinase WapQ no 0.31
    8 PP_0960 phospholipid ABC transporter binding protein no 0.30
    9 PP_0962 toluene-tolerance protein no 0.27
    10 PP_4570 conserved protein of unknown function no 0.27
    11 PP_0958 phospholipid ABC transporter ATP-binding subunit no 0.26
    12 PP_1232 conserved exported protein of unknown function no 0.25
    13 PP_0599 paraquat-inducible protein B no 0.24
    14 PP_0959 phospholipid ABC transporter no 0.24
    15 PP_0598 paraquat-inducible protein A no 0.21
    16 PP_5329 putative phosphate ABC transporter, periplasmic phosphate-binding protein no 0.21
    17 PP_5745 paraquat-inducible protein A no 0.20
    18 PP_5726 conserved protein of unknown function no 0.18
    19 PP_0555 Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha no 0.18
    20 PP_0282 L-arginine ABC transporter - periplasmic binding subunit no 0.17

    Or look for negative cofitness