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  • Top cofit genes for PP_3152 from Pseudomonas putida KT2440

    putative DNA-binding transcriptional regulator, LysR-type
    SEED: LysR family transcriptional regulator YneJ

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3151 NAD+-dependent succinate semialdehyde dehydrogenase 0.46 0.22
    2 PP_2769 putative Branched-chain amino acid ABC transporter, permease protein no 0.17
    3 PP_0157 transcriptional activator of gcdH, LysR family no 0.17
    4 PP_3014 conserved exported protein of unknown function no 0.16
    5 PP_4210 pyoverdine efflux carrier and ATP binding protein 0.39 0.16
    6 PP_4570 conserved protein of unknown function 0.57 0.16
    7 PP_2700 AhpC/TSA family protein no 0.16
    8 PP_3307 conserved protein of unknown function no 0.15
    9 PP_0490 formate dehydrogenase-O, beta subunit 0.40 0.15
    10 PP_3017 O6-methylguanine-DNA methyltransferase 0.54 0.15
    11 PP_0925 conserved protein of unknown function no 0.15
    12 PP_0551 MORN domain protein 0.37 0.15
    13 PP_1838 conserved membrane protein of unknown function no 0.14
    14 PP_1577 Phage tail tape meausure protein, lambda family no 0.14
    15 PP_0159 putative CoA-transferase family III no 0.14
    16 PP_1265 conserved protein of unknown function no 0.14
    17 PP_2775 putative glycine betaine/L-proline ABC transporter, periplasmic component no 0.14
    18 PP_4638 Methylenetetrahydrofolate reductase no 0.14
    19 PP_0173 putative transcriptional factor-related protein no 0.14
    20 PP_2080 NAD-specific glutamate dehydrogenase no 0.13

    Or look for negative cofitness