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  • Top cofit genes for PP_3149 from Pseudomonas putida KT2440

    Transcriptional regulator, AraC family
    SEED: Ethanolamine operon regulatory protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3147 putrescine-binding periplasmic protein no 0.23
    2 PP_3148 putative Glutamine synthetase no 0.22
    3 PP_4343 Flagellar biosynthesis protein FlhF no 0.22
    4 PP_4342 flagellar synthesis regulator, putative ATPase no 0.21
    5 PP_1976 HlyD family secretion protein no 0.20
    6 PP_5084 penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase 0.46 0.20
    7 PP_3146 putative Oxidoreductase no 0.20
    8 PP_4892 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.36 0.20
    9 PP_2160 NADPH-dependent 7-cyano-7-deazaguanine reductase no 0.20
    10 PP_0355 Response regulator no 0.19
    11 PP_4904 Flagellar motor rotation protein no 0.19
    12 PP_2077 diaminopimelate decarboxylase no 0.19
    13 PP_5337 LysR family transcriptional regulator 0.85 0.19
    14 PP_4905 Flagellar motor rotation protein 0.43 0.19
    15 PP_4337 chemotaxis response regulator protein-glutamate methylesterase of group 1 operon no 0.18
    16 PP_1623 RNA polymerase, sigma S (sigma 38) factor no 0.18
    17 PP_1325 putative lipoprotein no 0.18
    18 PP_4946 sodium/L-proline transporter no 0.18
    19 PP_4891 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.16 0.17
    20 PP_2362 putative usher protein no 0.17

    Or look for negative cofitness