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  • Top cofit genes for PP_3146 from Pseudomonas putida KT2440

    putative Oxidoreductase
    SEED: Gamma-glutamyl-putrescine oxidase (EC1.4.3.-)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4304 Cation transporter, VIC family no 0.60
    2 PP_3148 putative Glutamine synthetase 0.75 0.56
    3 PP_3147 putrescine-binding periplasmic protein no 0.44
    4 PP_5096 putative factor involved in shape determination 0.28 0.43
    5 PP_0247 Osmolarity sensor protein EnvZ no 0.26
    6 PP_5183 glutamylpolyamine synthetase 0.60 0.24
    7 PP_5181 spermidine/putrescine ABC transporter - periplasmic subunit no 0.24
    8 PP_5179 spermidine/putrescine ABC transporter - ATP binding subunit no 0.24
    9 PP_5278 4-guanidinobutyraldehyde dehydrogenase 0.46 0.24
    10 PP_5178 spermidine/putrescine ABC transporter - inner membrane subunit no 0.23
    11 PP_3990 substrate or modulator of FtsH-mediated proteolysis no 0.22
    12 PP_2230 putative K(+)/H(+) antiporter subunit A/B no 0.22
    13 PP_5353 conserved exported protein of unknown function no 0.21
    14 PP_5182 polyamine:pyruvate transaminase no 0.21
    15 PP_3149 Transcriptional regulator, AraC family no 0.20
    16 PP_1896 putative ABC transporter - permease subunit 0.43 0.20
    17 PP_4900 epoxyqueuosine reductase no 0.19
    18 PP_4891 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.14 0.19
    19 PP_2228 putative K(+)/H(+) antiporter subunit D 0.13 0.19
    20 PP_5177 spermidine/putrescine ABC transporter - permease subunit no 0.18

    Or look for negative cofitness