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  • Top cofit genes for PP_3144 from Pseudomonas putida KT2440

    L-serine dehydratase
    SEED: L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17)
    KEGG: L-serine dehydratase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1786 putative Glycosyl transferase no 0.33
    2 PP_4722 Transcription elongation factor GreA no 0.31
    3 PP_3957 choline/carnitine/betaine transporter BetTC no 0.30
    4 PP_1320 stringent starvation protein A no 0.30
    5 PP_1795 conserved protein of unknown function no 0.29
    6 PP_1370 Glycosyl transferase, group 1 family protein no 0.29
    7 PP_2852 putative Sulfatase domain protein no 0.28
    8 PP_0439 conserved protein of unknown function no 0.28
    9 PP_1527 tRNA threonylcarbamoyladenosine dehydratase (t(6)A37 dehydratase) 0.58 0.27
    10 PP_4978 conserved protein of unknown function no 0.26
    11 PP_4475 succinylglutamate desuccinylase no 0.26
    12 PP_0674 ADP/ATP ratio sensor and inhibitor of translation 0.35 0.26
    13 PP_4721 conserved membrane protein of unknown function no 0.25
    14 PP_4710 tRNA pseudouridine 55 synthase 0.58 0.25
    15 PP_3143 Transcriptional regulator, LysR family 1.00 0.25
    16 PP_2223 conserved protein of unknown function no 0.24
    17 PP_0247 Osmolarity sensor protein EnvZ no 0.24
    18 PP_5294 Ribonuclease PH no 0.23
    19 PP_0498 conserved protein of unknown function no 0.23
    20 PP_4676 methionine sulfoxide reductase catalytic subunit 0.42 0.23

    Or look for negative cofitness