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  • Top cofit genes for PP_3142 from Pseudomonas putida KT2440

    putative Sugar transferase
    SEED: capsular polysaccharide biosynthesis protein
    KEGG: putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3126 putative polysaccharide exported protein no 0.29
    2 PP_2853 conserved exported protein of unknown function 0.36 0.25
    3 PP_4246 Periplasmic binding protein 0.33 0.21
    4 PP_3141 Glycosyl transferase, WecB/TagA/CpsF family no 0.19
    5 PP_3139 Glycosyl transferase, group 1 family protein no 0.18
    6 PP_2477 isoquinoline 1-oxidoreductase subunit alpha no 0.18
    7 PP_4349 conserved protein of unknown function no 0.18
    8 PP_5384 copper sensor protein no 0.18
    9 PP_5639 conserved exported protein of unknown function no 0.18
    10 PP_1011 glucokinase no 0.18
    11 PP_1304 sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase 0.18 0.17
    12 PP_3452 GGDEF domain protein no 0.17
    13 PP_3417 D-gluconate transporter no 0.17
    14 PP_1012 DNA-binding response regulator no 0.17
    15 PP_3137 Glycosyl transferase, group 2 family protein no 0.17
    16 PP_3138 VirK domain protein no 0.17
    17 PP_3127 putative Exopolysaccharide transport protein no 0.17
    18 PP_1014 aldose-ketose isomerase no 0.17
    19 PP_3136 putative O-acetyltransferase no 0.17
    20 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.47 0.17

    Or look for negative cofitness