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  • Top cofit genes for PP_3123 from Pseudomonas putida KT2440

    acetoacetyl CoA-transferase (subunit B)
    SEED: Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)
    KEGG: 3-oxoacid CoA-transferase subunit B

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3122 acetoacetyl CoA-transferase (subunit A) 0.93 0.84
    2 PP_3121 transcriptional regulator, LysR family 0.72 0.75
    3 PP_3073 3-hydroxybutyrate dehydrogenase 0.42 0.42
    4 PP_4064 isovaleryl-CoA dehydrogenase 0.77 0.40
    5 PP_4067 methylcrotonyl-CoA carboxylase biotin-containing subunit alpha 0.73 0.37
    6 PP_4065 methylcrotonyl-CoA carboxylase biotin-containing subunit beta 0.72 0.37
    7 PP_4116 isocitrate lyase 0.77 0.36
    8 PP_3075 putative transcriptional regulator 0.34 0.36
    9 PP_3074 D-beta-hydroxybutyrate permease 0.60 0.34
    10 PP_0356 malate synthase G 0.72 0.33
    11 PP_4063 putative Long-chain-fatty-acid-CoA ligase no 0.32
    12 PP_5659 protein of unknown function no 0.30
    13 PP_4066 methylglutaconyl-CoA hydratase 0.58 0.29
    14 PP_3433 4-hydroxyphenylpyruvate dioxygenase 0.83 0.26
    15 PP_4621 Homogentisate 1,2-dioxygenase 0.56 0.26
    16 PP_1617 S-formylglutathione hydrolase / S-lactoylglutathione hydrolase 0.28 0.26
    17 PP_2675 Cytochrome c-type protein no 0.24
    18 PP_3754 Beta-ketothiolase BktB no 0.24
    19 PP_1826 Hydrolase, isochorismatase family 0.40 0.23
    20 PP_3603 Transcriptional regulator, GntR family 0.42 0.23

    Or look for negative cofitness