Top cofit genes for PP_3122 from Pseudomonas putida KT2440

acetoacetyl CoA-transferase (subunit A)
SEED: Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)
KEGG: 3-oxoacid CoA-transferase subunit A

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3123		acetoacetyl CoA-transferase (subunit B)	0.93	0.84
2	PP_3121		transcriptional regulator, LysR family	0.69	0.68
3	PP_4064		isovaleryl-CoA dehydrogenase	0.88	0.43
4	PP_4065		methylcrotonyl-CoA carboxylase biotin-containing subunit beta	0.87	0.39
5	PP_4067		methylcrotonyl-CoA carboxylase biotin-containing subunit alpha	0.87	0.39
6	PP_4116		isocitrate lyase	0.89	0.34
7	PP_4063		putative Long-chain-fatty-acid-CoA ligase	no	0.32
8	PP_0356		malate synthase G	0.64	0.31
9	PP_3073		3-hydroxybutyrate dehydrogenase	0.77	0.31
10	PP_5659		protein of unknown function	no	0.29
11	PP_4066		methylglutaconyl-CoA hydratase	0.63	0.29
12	PP_3754		Beta-ketothiolase BktB	no	0.28
13	PP_3433		4-hydroxyphenylpyruvate dioxygenase	0.95	0.27
14	PP_2791		4-hydroxypentanoyl-CoA kinase, subunit LvaA (from data)	no	0.27
15	PP_3075		putative transcriptional regulator	0.38	0.27
16	PP_3753		Transcriptional regulator, AraC family	no	0.25
17	PP_2675		Cytochrome c-type protein	0.21	0.25
18	PP_2302		DNA-binding, ATP-dependent protease	no	0.24
19	PP_2790		Sigma-54 dependent sensory box protein	no	0.24
20	PP_4619		Maleylacetoacetate isomerase	0.91	0.23

Or look for negative cofitness