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  • Top cofit genes for PP_3118 from Pseudomonas putida KT2440

    DNA linked enzyme involved in DNA repair
    KEGG: protein ImuB

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1906 ribosomal large subunit pseudouridine synthase C no 0.21
    2 PP_0218 Sensory box protein no 0.21
    3 PP_0951 Ribosome hibernation promoting factor 0.37 0.21
    4 PP_0397 protein kinase no 0.20
    5 PP_0872 Peptide chain release factor 3 no 0.20
    6 PP_0396 conserved protein of unknown function no 0.19
    7 PP_0395 putative type IV piliation protein 0.30 0.19
    8 PP_4158 sensor protein no 0.19
    9 PP_0164 conserved protein of unknown function no 0.19
    10 PP_4902 Oligoribonuclease 0.36 0.18
    11 PP_5327 putative phosphate ABC transporter, permease subunit 0.27 0.18
    12 PP_2903 peptidyl-prolyl cis-trans isomerase B (rotamase B) no 0.18
    13 PP_0123 DNA polymerase I, 5 0.48 0.18
    14 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 no 0.18
    15 PP_4471 Magnesium transporter no 0.18
    16 PP_4337 chemotaxis response regulator protein-glutamate methylesterase of group 1 operon no 0.18
    17 PP_0194 Transcriptional regulatory protein AlgP no 0.18
    18 PP_4066 methylglutaconyl-CoA hydratase no 0.18
    19 PP_4131 NADH-quinone oxidoreductase subunit N no 0.17
    20 PP_3560 Transcriptional regulator, LysR family no 0.17

    Or look for negative cofitness