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  • Top cofit genes for PP_3100 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Uncharacterized protein ImpB
    KEGG: type VI secretion system protein ImpB

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3787 conserved protein of unknown function no 0.22
    2 PP_1782 dTDP-4-dehydrorhamnose 3,5-epimerase no 0.20
    3 PP_2714 Sensor histidine kinase no 0.20
    4 PP_3790 diaminopimelate epimerase no 0.19
    5 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.19
    6 PP_0261 adenosine-3'(2'),5'-bisphosphate nucleotidase 0.47 0.18
    7 PP_0506 putative ABC efflux transporter, permease protein no 0.18
    8 PP_3667 Creatinase no 0.18
    9 PP_1111 putative Synthetase 0.26 0.17
    10 PP_3788 putative Non-ribosomal peptide synthetase no 0.17
    11 PP_3244 Magnesium transporter, MgtC family no 0.17
    12 PP_1109 Transcriptional regulator, GntR family no 0.17
    13 PP_5702 conserved protein of unknown function no 0.17
    14 PP_2348 Sensor histidine kinase no 0.17
    15 PP_3812 putative Lipase no 0.17
    16 PP_3302 RND efflux transporter 0.47 0.17
    17 PP_3336 conserved protein of unknown function no 0.16
    18 PP_2498 conserved protein of unknown function no 0.16
    19 PP_3042 putative Terminase, large subunit no 0.16
    20 PP_1110 serine acetyltransferase no 0.16

    Or look for negative cofitness