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  • Top cofit genes for PP_3098 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Uncharacterized protein ImpF
    KEGG: type VI secretion system protein ImpF

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3346 Nickel transporter ATP-binding protein no 0.21
    2 PP_3496 Endoribonuclease L-PSP no 0.20
    3 PP_4223 diaminobutyrate-2-oxoglutarate transaminase no 0.19
    4 PP_1102 conserved protein of unknown function no 0.19
    5 PP_0566 translation-related factor 0.30 0.19
    6 PP_4094 conserved protein of unknown function no 0.18
    7 PP_5424 conserved protein of unknown function no 0.18
    8 PP_3360 conserved membrane protein of unknown function no 0.17
    9 PP_2847 Urease accessory protein UreJ no 0.17
    10 PP_2866 FMN-dependent NADH-azoreductase 1 no 0.17
    11 PP_5202 putative cell division protein no 0.16
    12 PP_4246 Periplasmic binding protein no 0.16
    13 PP_0584 Methyl-accepting chemotaxis transducer no 0.16
    14 PP_0225 sulfur compound ABC transporter - ATP-binding subunit no 0.16
    15 PP_5156 conserved exported protein of unknown function no 0.16
    16 PP_0818 conserved protein of unknown function no 0.15
    17 PP_4778 23S rRNA pseudouridine 2457 synthase no 0.15
    18 PP_5603 putative FAD dependent oxidoreductase no 0.15
    19 PP_1301 quality control serine endoprotease DegS 0.30 0.15
    20 PP_4846 L-amino acid N-acyltransferase no 0.14

    Or look for negative cofitness