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  • Top cofit genes for PP_3095 from Pseudomonas putida KT2440

    Protein ClpV1
    SEED: ClpB protein
    KEGG: type VI secretion system protein VasG

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5639 conserved exported protein of unknown function no 0.30
    2 PP_4785 conserved exported protein of unknown function no 0.28
    3 PP_0570 lipoprotein of unknown function 0.64 0.27
    4 PP_2187 Universal stress protein family no 0.25
    5 PP_3855 conserved protein of unknown function no 0.24
    6 PP_3065 Pyocin R2_PP, tail formation no 0.24
    7 PP_3417 D-gluconate transporter no 0.24
    8 PP_1009 glyceraldehyde-3-phosphate dehydrogenase 0.20 0.23
    9 PP_2007 P-47-related protein no 0.23
    10 PP_1011 glucokinase 0.39 0.23
    11 PP_1015 mannose/glucose ABC transporter, glucose-binding periplasmic protein no 0.23
    12 PP_2840 putative Membrane protein no 0.22
    13 PP_2586 putative amino acid transporter no 0.22
    14 PP_1811 UDP-N-acetylglucosamine-2-epimerase 0.24 0.21
    15 PP_4270 conserved exported protein of unknown function no 0.21
    16 PP_2892 conserved exported protein of unknown function 0.59 0.21
    17 PP_2021 L-alpha-hydroxyglutaric acid gamma-lactonase 0.20 0.21
    18 PP_0572 peptidoglycan glycosyltransferase no 0.21
    19 PP_1818 conserved exported protein of unknown function no 0.21
    20 PP_2603 conserved protein of unknown function no 0.20

    Or look for negative cofitness