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  • Top cofit genes for PP_3084 from Pseudomonas putida KT2440

    putative Outer membrane ferric siderophore receptor
    SEED: Ferrichrome-iron receptor
    KEGG: iron complex outermembrane recepter protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5713 conserved protein of unknown function no 0.20
    2 PP_4755 Outer membrane ferrichrome-iron receptor no 0.17
    3 PP_3665 AraC family transcriptional regulator no 0.17
    4 PP_3547 putative NAD(P)-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain no 0.17
    5 PP_1279 Probable alginate O-acetylase AlgJ no 0.17
    6 PP_0704 RNA polymerase sigma-70 factor, ECF subfamily no 0.16
    7 PP_1721 putative phosphoserine phosphatase no 0.16
    8 PP_3426 Multidrug efflux RND transporter MexF no 0.16
    9 PP_4838 Outer membrane copper receptor OprC 0.38 0.15
    10 PP_1288 GDP-mannose 6-dehydrogenase no 0.15
    11 PP_1029 conserved membrane protein of unknown function no 0.15
    12 PP_2311 Mg-dependent cytoplasmic DNase / RNase no 0.15
    13 PP_4705 Glyoxalase no 0.15
    14 PP_0618 Branched-chain amino acid ABC transporter, permease protein no 0.15
    15 PP_3579 conserved membrane protein of unknown function 0.39 0.15
    16 PP_3620 cofactor of beta-methylthiolation of ribosomal protein S12 no 0.15
    17 PP_4276 Chromosome partition protein Smc no 0.15
    18 PP_1918 septation protein 0.70 0.15
    19 PP_0883 glycine-glutamate dipeptide porin 0.69 0.15
    20 PP_1651 two-component response regulator no 0.15

    Or look for negative cofitness