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  • Top cofit genes for PP_3080 from Pseudomonas putida KT2440

    tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase
    SEED: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)
    KEGG: 3-deoxy-7-phosphoheptulonate synthase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4621 Homogentisate 1,2-dioxygenase 0.35 0.48
    2 PP_3433 4-hydroxyphenylpyruvate dioxygenase 0.32 0.44
    3 PP_4619 Maleylacetoacetate isomerase 0.36 0.36
    4 PP_3527 Transcriptional regulator, TetR family no 0.35
    5 PP_3590 aromatic-amino-acid transaminase (EC 2.6.1.57) (from data) no 0.30
    6 PP_4620 Fumarylacetoacetase 0.32 0.30
    7 PP_4197 Transcriptional regulator, GntR family 0.32 0.27
    8 PP_4767 amino acid exporter for phenylalanine, threonine no 0.27
    9 PP_3434 conserved protein of unknown function no 0.24
    10 PP_5236 conserved protein of unknown function no 0.22
    11 PP_1416 putative Tricarboxylate transport protein TctA 0.28 0.22
    12 PP_4285 5-hydroxyisourate hydrolase 0.44 0.21
    13 PP_0508 conserved exported protein of unknown function 0.29 0.21
    14 PP_1420 Transcriptional regulatory protein tctD 0.34 0.20
    15 PP_1364 conserved exported protein of unknown function no 0.20
    16 PP_4659 gamma-glutamyltranspeptidase 0.39 0.20
    17 PP_4489 sigma-54 dependent transcriptional regulator 0.36 0.19
    18 PP_1993 putative motility protein fimV no 0.19
    19 PP_3555 putative Transmembrane sensor 0.42 0.19
    20 PP_1419 tricarboxylate-specific outer membrane porin no 0.19

    Or look for negative cofitness