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  • Top cofit genes for PP_3076 from Pseudomonas putida KT2440

    putative ABC transporter permease protein
    SEED: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
    KEGG: microcin C transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3074 D-beta-hydroxybutyrate permease no 0.31
    2 PP_3075 putative transcriptional regulator 0.70 0.23
    3 PP_2049 Alcohol dehydrogenase, iron-containing no 0.22
    4 PP_4882 Iron ABC transporter, permease protein no 0.20
    5 PP_3073 3-hydroxybutyrate dehydrogenase 0.22 0.20
    6 PP_3123 acetoacetyl CoA-transferase (subunit B) no 0.20
    7 PP_4588 putative oxidoreductase (nitroreductase family) no 0.19
    8 PP_2057 Uncharacterized transporter YraO no 0.19
    9 PP_0507 putative ABC efflux transporter, ATP-binding protein no 0.18
    10 PP_0506 putative ABC efflux transporter, permease protein no 0.17
    11 PP_4922 Phosphomethylpyrimidine synthase no 0.17
    12 PP_3121 transcriptional regulator, LysR family no 0.16
    13 PP_2348 Sensor histidine kinase no 0.16
    14 PP_4149 putative inner membrane ABC transporter permease protein 0.59 0.16
    15 PP_3949 HTH-type transcriptional repressor NicS no 0.16
    16 PP_5104 thiazole synthase no 0.16
    17 PP_3078 putative ABC transporter, periplasmic binding protein 0.70 0.16
    18 PP_3790 diaminopimelate epimerase no 0.16
    19 PP_0278 conserved protein of unknown function no 0.16
    20 PP_0675 glutamate dehydrogenase, NADP-dependent no 0.15

    Or look for negative cofitness