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  • Top cofit genes for PP_3074 from Pseudomonas putida KT2440

    D-beta-hydroxybutyrate permease
    SEED: D-beta-hydroxybutyrate permease

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3073 3-hydroxybutyrate dehydrogenase 0.50 0.36
    2 PP_3123 acetoacetyl CoA-transferase (subunit B) 0.22 0.34
    3 PP_3075 putative transcriptional regulator 0.68 0.33
    4 PP_3076 putative ABC transporter permease protein no 0.31
    5 PP_3121 transcriptional regulator, LysR family 0.36 0.25
    6 PP_0057 major facilitator family transporter no 0.23
    7 PP_3122 acetoacetyl CoA-transferase (subunit A) 0.51 0.21
    8 PP_2049 Alcohol dehydrogenase, iron-containing no 0.20
    9 PP_2983 conserved protein of unknown function no 0.20
    10 PP_4162 conserved membrane protein of unknown function no 0.17
    11 PP_3949 HTH-type transcriptional repressor NicS no 0.16
    12 PP_3104 conserved protein of unknown function no 0.15
    13 PP_4503 DNA-binding response regulator 0.31 0.15
    14 PP_3078 putative ABC transporter, periplasmic binding protein 0.45 0.15
    15 PP_3359 putative Hydroxycinnamic acid degradation regulator no 0.15
    16 PP_0062 3-methyl-adenine DNA glycosylase I no 0.15
    17 PP_0264 Sensor histidine kinase no 0.15
    18 PP_4209 ABC export system, membrane fusion protein no 0.15
    19 PP_4627 transcriptional regulator, LysR family no 0.15
    20 PP_4589 D-isomer specific 2-hydroxyacid dehydrogenase family protein 0.55 0.15

    Or look for negative cofitness