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  • Top cofit genes for PP_3066 from Pseudomonas putida KT2440

    Pyocin R2_PP, lytic enzyme
    SEED: FIG101079: Lytic enzyme
    KEGG: putative chitinase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0995 conserved membrane protein of unknown function no 0.19
    2 PP_4505 Sensor histidine kinase 0.39 0.19
    3 PP_5084 penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase no 0.19
    4 PP_1598 regulatory intramembrane protein RIP zinc protease 0.24 0.18
    5 PP_2927 conserved protein of unknown function no 0.18
    6 PP_2871 Class II aldolase/adducin domain protein no 0.18
    7 PP_2304 putative Peptidyl-prolyl cis-trans isomerase D 0.82 0.17
    8 PP_3777 conserved protein of unknown function no 0.17
    9 PP_4286 allantoinase 0.22 0.17
    10 PP_4342 flagellar synthesis regulator, putative ATPase no 0.17
    11 PP_4918 conserved protein of unknown function no 0.17
    12 PP_4008 ATP-dependent serine protease no 0.16
    13 PP_3203 Major facilitator family transporter no 0.16
    14 PP_1325 putative lipoprotein no 0.16
    15 PP_3934 Transcriptional regulator, LysR family no 0.16
    16 PP_2331 conserved membrane protein of unknown function no 0.16
    17 PP_1734 Probable septum site-determining protein MinC no 0.15
    18 PP_1445 carbohydrate-selective porin no 0.15
    19 PP_2319 conserved protein of unknown function no 0.15
    20 PP_3816 Polyamine ABC transporter, permease protein 0.26 0.15

    Or look for negative cofitness