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  • Top cofit genes for PP_3065 from Pseudomonas putida KT2440

    Pyocin R2_PP, tail formation
    SEED: FIG032563: Phage tail protein D

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5639 conserved exported protein of unknown function no 0.36
    2 PP_0570 lipoprotein of unknown function 0.42 0.34
    3 PP_4571 cysteine synthase A 0.34 0.33
    4 PP_4265 DNA-binding transcriptional dual regulator 0.29 0.31
    5 PP_0572 peptidoglycan glycosyltransferase 0.59 0.30
    6 PP_1002 arginine/ornithine antiporter no 0.29
    7 PP_0856 conserved lipoprotein of unknown function no 0.28
    8 PP_2603 conserved protein of unknown function no 0.27
    9 PP_4693 RNA polymerase-binding transcription factor DksA no 0.26
    10 PP_3855 conserved protein of unknown function no 0.26
    11 PP_1582 conserved protein of unknown function no 0.25
    12 PP_0506 putative ABC efflux transporter, permease protein 0.26 0.24
    13 PP_3064 Phage tail protein no 0.24
    14 PP_3095 Protein ClpV1 no 0.24
    15 PP_0575 conserved membrane protein of unknown function 0.26 0.24
    16 PP_4560 putative Ribonuclease BN no 0.23
    17 PP_3339 conserved exported protein of unknown function 0.54 0.23
    18 PP_0172 ABC transporter, permease protein no 0.22
    19 PP_2537 conserved protein of unknown function no 0.21
    20 PP_4285 5-hydroxyisourate hydrolase no 0.21

    Or look for negative cofitness