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  • Top cofit genes for PP_3060 from Pseudomonas putida KT2440

    putative tail sheath protein
    SEED: Phage major tail tube protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding 0.26 0.25
    2 PP_0506 putative ABC efflux transporter, permease protein no 0.24
    3 PP_3790 diaminopimelate epimerase no 0.24
    4 PP_4922 Phosphomethylpyrimidine synthase no 0.22
    5 PP_0507 putative ABC efflux transporter, ATP-binding protein 0.29 0.22
    6 PP_2714 Sensor histidine kinase no 0.21
    7 PP_1348 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase no 0.20
    8 PP_3788 putative Non-ribosomal peptide synthetase no 0.20
    9 PP_3376 putative phosphonate dehydrogenase no 0.19
    10 PP_5104 thiazole synthase no 0.19
    11 PP_4421 putative aminotransferase no 0.19
    12 PP_3786 aminotransferase no 0.19
    13 PP_2637 endo-1,4-D-glucanase subunit of cellulose synthase 0.23 0.18
    14 PP_0889 conserved exported protein of unknown function no 0.18
    15 PP_4276 Chromosome partition protein Smc no 0.18
    16 PP_4096 conserved exported protein of unknown function no 0.18
    17 PP_1415 putative membrane associated enzyme subunit 0.31 0.18
    18 PP_0662 putative Threonine synthase no 0.18
    19 PP_2348 Sensor histidine kinase no 0.17
    20 PP_2129 conserved protein of unknown function no 0.17

    Or look for negative cofitness