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  • Top cofit genes for PP_3054 from Pseudomonas putida KT2440

    Pyocin R2_PP, baseplate/tail fiber protein
    SEED: Baseplate assembly protein J

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2045 Metallo-beta-lactamase family protein no 0.24
    2 PP_3398 putative Curli fiber surface-exposed nucleator CsgB no 0.21
    3 PP_2782 Pyridoxalphosphate dependent aminotransferase, class III no 0.21
    4 PP_5156 conserved exported protein of unknown function no 0.21
    5 PP_0556 Acetoin catabolism protein no 0.20
    6 PP_5137 ferric iron ABC transporter, ATP-binding protein no 0.19
    7 PP_2025 Exonuclease SbcD no 0.19
    8 PP_4221 non-ribosomal peptide synthetase (subunit of ferribactin synthase) no 0.19
    9 PP_1813 ComEA-related protein no 0.19
    10 PP_3461 quinohemoprotein amine dehydrogenase modification protein no 0.19
    11 PP_0705 DNA-3-methyladenine glycosylase no 0.18
    12 PP_3751 putative Cyanate transporter no 0.18
    13 PP_1821 Glutathione S-transferase family protein no 0.18
    14 PP_0358 conserved membrane protein of unknown function 0.75 0.18
    15 PP_5554 protein of unknown function no 0.17
    16 PP_1657 modified nucleoside triphosphate pyrophosphohydrolase no 0.17
    17 PP_2127 Sensor histidine kinase no 0.17
    18 PP_0797 conserved protein of unknown function no 0.17
    19 PP_4219 non-ribosomal peptide synthetase no 0.17
    20 PP_0063 putative Lipid A biosynthesis lauroyl acyltransferase 0.40 0.16

    Or look for negative cofitness