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  • Top cofit genes for PP_3044 from Pseudomonas putida KT2440

    Phage portal protein, lambda family
    SEED: FIG00963359: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3949 HTH-type transcriptional repressor NicS no 0.23
    2 PP_1532 putative Phage integrase no 0.21
    3 PP_2192 putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein no 0.20
    4 PP_4339 Protein phosphatase CheZ no 0.20
    5 PP_5134 conserved protein of unknown function no 0.19
    6 PP_3353 putative sulfatase-modifying factor (C-alpha-formyglycine- generating enzyme) no 0.19
    7 PP_3733 putative ABC transporter lipoprotein no 0.19
    8 PP_2026 conserved protein of unknown function no 0.19
    9 PP_2568 Ring-cleaving dioxygenase 0.35 0.18
    10 PP_4905 Flagellar motor rotation protein no 0.18
    11 PP_2071 conserved protein of unknown function no 0.18
    12 PP_3169 conserved membrane protein of unknown function no 0.17
    13 PP_1087 Outer membrane protein, OmpA family no 0.17
    14 PP_3773 conserved protein of unknown function no 0.17
    15 PP_4549 long-chain-fatty-acid/CoA ligase no 0.17
    16 PP_5716 conserved protein of unknown function no 0.17
    17 PP_1111 putative Synthetase no 0.17
    18 PP_2376 Esterified fatty acid cis/trans isomerase no 0.17
    19 PP_0248 Probable alpha-L-glutamate ligase no 0.17
    20 PP_1109 Transcriptional regulator, GntR family no 0.16

    Or look for negative cofitness