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  • Top cofit genes for PP_3040 from Pseudomonas putida KT2440

    Pyocin R2_PP, holin
    SEED: Holin

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0910 conserved exported protein of unknown function no 0.20
    2 PP_0506 putative ABC efflux transporter, permease protein no 0.19
    3 PP_0482 bacterioferritin 0.25 0.17
    4 PP_0651 Acetyltransferase, GNAT family no 0.17
    5 PP_3408 cobalt transporter subunit A no 0.17
    6 PP_5615 conserved protein of unknown function no 0.17
    7 PP_2766 Long-chain-fatty-acid--CoA ligase-related protein no 0.17
    8 PP_4937 toluene tolerance protein no 0.17
    9 PP_2348 Sensor histidine kinase 0.46 0.17
    10 PP_2220 C4-type zinc finger protein, DksA/TraR family no 0.16
    11 PP_1271 putative Multidrug efflux MFS transporter no 0.16
    12 PP_2646 conserved protein of unknown function no 0.16
    13 PP_5486 conserved protein of unknown function no 0.16
    14 PP_2494 conserved protein of unknown function no 0.16
    15 PP_0497 Transcriptional regulator, Cro/CI family no 0.16
    16 PP_0276 Transcriptional regulator, Cro/CI family no 0.16
    17 PP_3405 conserved membrane protein of unknown function no 0.16
    18 PP_3443 putative glyceraldehyde-3-phosphate dehydrogenase no 0.16
    19 PP_1518 conserved exported protein of unknown function 0.17 0.15
    20 PP_3787 conserved protein of unknown function no 0.15

    Or look for negative cofitness