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Cofit
Protein
Homologs
Top cofit genes for PP_3040 from
Pseudomonas putida KT2440
Pyocin R2_PP, holin
SEED: Holin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_0910
conserved exported protein of unknown function
no
0.20
2
PP
_0506
putative ABC efflux transporter, permease protein
no
0.19
3
PP
_0482
bacterioferritin
0.25
0.17
4
PP
_0651
Acetyltransferase, GNAT family
no
0.17
5
PP
_3408
cobalt transporter subunit A
no
0.17
6
PP
_5615
conserved protein of unknown function
no
0.17
7
PP
_2766
Long-chain-fatty-acid--CoA ligase-related protein
no
0.17
8
PP
_4937
toluene tolerance protein
no
0.17
9
PP
_2348
Sensor histidine kinase
0.46
0.17
10
PP
_2220
C4-type zinc finger protein, DksA/TraR family
no
0.16
11
PP
_1271
putative Multidrug efflux MFS transporter
no
0.16
12
PP
_2646
conserved protein of unknown function
no
0.16
13
PP
_5486
conserved protein of unknown function
no
0.16
14
PP
_2494
conserved protein of unknown function
no
0.16
15
PP
_0497
Transcriptional regulator, Cro/CI family
no
0.16
16
PP
_0276
Transcriptional regulator, Cro/CI family
no
0.16
17
PP
_3405
conserved membrane protein of unknown function
no
0.16
18
PP
_3443
putative glyceraldehyde-3-phosphate dehydrogenase
no
0.16
19
PP
_1518
conserved exported protein of unknown function
0.17
0.15
20
PP
_3787
conserved protein of unknown function
no
0.15
Or look for
negative cofitness