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  • Top cofit genes for PP_3029 from Pseudomonas putida KT2440

    DNA cytosine methyltransferase family protein
    SEED: DNA cytosine methyltransferase family protein
    KEGG: DNA (cytosine-5-)-methyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4601 Transcriptional regulator, LysR family no 0.22
    2 PP_4799 putative Muramoyltetrapeptide carboxypeptidase no 0.22
    3 PP_0691 Glutamate 5-kinase no 0.22
    4 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex 0.55 0.18
    5 PP_5130 phosphoethanolamine/phosphocholine phosphatase no 0.18
    6 PP_4004 DNA translocase FtsK 0.28 0.18
    7 PP_1217 Holliday junction ATP-dependent DNA helicase RuvB no 0.18
    8 PP_0510 Thioredoxin no 0.17
    9 PP_4999 dihydroorotase-like protein no 0.17
    10 PP_2369 Leucine-rich repeat domain protein no 0.17
    11 PP_1042 Type II secretion system protein K no 0.17
    12 PP_4723 Carbamoyl-phosphate synthase large chain no 0.17
    13 PP_1852 putative enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) no 0.17
    14 PP_5485 putative N-acetyltransferase, GNAT domain no 0.16
    15 PP_4589 D-isomer specific 2-hydroxyacid dehydrogenase family protein no 0.16
    16 PP_4162 conserved membrane protein of unknown function no 0.16
    17 PP_2871 Class II aldolase/adducin domain protein no 0.16
    18 PP_1201 conserved exported protein of unknown function no 0.16
    19 PP_4693 RNA polymerase-binding transcription factor DksA 0.62 0.16
    20 PP_3201 BNR domain protein no 0.16

    Or look for negative cofitness