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Cofit
Protein
Homologs
Top cofit genes for PP_3001 from
Pseudomonas putida KT2440
CAIB/BAIF family protein
SEED: CAIB/BAIF family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_2891
Acetyltransferase, GNAT family
no
0.23
2
PP
_2368
2,5-diketo-D-gluconate reductase
no
0.21
3
PP
_5350
Transcriptional regulator, RpiR family
no
0.20
4
PP
_0138
conserved membrane protein of unknown function
no
0.19
5
PP
_3009
conserved protein of unknown function
no
0.19
6
PP
_4696
Nitrogen regulation protein NR(I)
no
0.19
7
PP
_0701
fosmidomycin efflux system
no
0.19
8
PP
_3564
Transcriptional regulator, AraC family
no
0.19
9
PP
_1963
conserved protein of unknown function
no
0.19
10
PP
_3360
conserved membrane protein of unknown function
no
0.18
11
PP
_1022
glucose 6-phosphate-1-dehydrogenase
no
0.18
12
PP
_5153
putative isomerase/hydrolase
no
0.18
13
PP
_4224
Sensor histidine kinase
no
0.18
14
PP
_4913
conserved protein of unknown function
no
0.18
15
PP
_1144
conserved membrane protein of unknown function
no
0.18
16
PP
_2210
LysR family transcriptional regulator
no
0.18
17
PP
_4240
putative Microcin b17 processing protein mcbd
no
0.18
18
PP
_5048
two-component system DNA-binding transcriptional dual regulator GlnL/GlnG
0.39
0.17
19
PP
_1156
putative inner membrane protein
no
0.17
20
PP
_3238
putative Transcriptional regulator PyrR
no
0.17
Or look for
negative cofitness