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Cofit
Protein
Homologs
Top cofit genes for PP_2971 from
Pseudomonas putida KT2440
transposase
SEED: Mobile element protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_2293
DNA maturase B
no
0.33
2
PP
_3719
Putrescine-binding periplasmic protein
no
0.31
3
PP
_2077
diaminopimelate decarboxylase
no
0.29
4
PP
_0804
Protein secretion ABC efflux system, permease and ATP-binding protein
no
0.29
5
PP
_1145
RNA polymerase-associated protein RapA
no
0.28
6
PP
_4375
flagellar chaperone, inhibits premature FliC assembly
no
0.28
7
PP
_4008
ATP-dependent serine protease
no
0.27
8
PP
_0489
formate dehydrogenase-O major subunit
0.47
0.27
9
PP
_1319
Ubiquinol--cytochrome c reductase, cytochrome c1
no
0.27
10
PP
_2808
putative Oxidoreductase
no
0.27
11
PP
_0823
Selenide, water dikinase
no
0.27
12
PP
_1498
putative Lipoprotein
no
0.27
13
PP
_3073
3-hydroxybutyrate dehydrogenase
no
0.26
14
PP
_4942
conserved protein of unknown function
no
0.26
15
PP
_4337
chemotaxis response regulator protein-glutamate methylesterase of group 1 operon
0.55
0.26
16
PP
_4378
flagellin, filament structural protein
no
0.26
17
PP
_4380
Flagellar hook-associated protein FlgL
no
0.26
18
PP
_3916
conserved protein of unknown function
no
0.26
19
PP
_0806
putative Surface adhesion protein
no
0.26
20
PP
_4376
flagellar filament capping protein
0.57
0.26
Or look for
negative cofitness