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  • Top cofit genes for PP_2949 from Pseudomonas putida KT2440

    putative permease
    SEED: Permease of the drug/metabolite transporter (DMT) superfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1454 conserved protein of unknown function no 0.20
    2 PP_2187 Universal stress protein family no 0.20
    3 PP_2593 Ferric siderophore ABC transporter, permease protein 0.13 0.19
    4 PP_1137 high-affinity branched-chain amino acid transporter, ATP binding no 0.18
    5 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD no 0.18
    6 PP_3360 conserved membrane protein of unknown function no 0.18
    7 PP_4867 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) no 0.18
    8 PP_4982 putative cytochrome b561, iron-regulated 0.28 0.17
    9 PP_2120 Methyl-accepting chemotaxis protein CtpH no 0.17
    10 PP_t49 tRNA-Met no 0.17
    11 PP_5208 putative translation related protein no 0.17
    12 PP_4178 Dienelactone hydrolase family protein 0.14 0.17
    13 PP_1422 conserved protein of unknown function no 0.16
    14 PP_5482 protein of unknown function no 0.16
    15 PP_0049 conserved protein of unknown function no 0.16
    16 PP_3153 conserved exported protein of unknown function no 0.16
    17 PP_5277 Major facilitator family transporter 0.36 0.16
    18 PP_3477 Putative secretion type II protein related to protein G 0.51 0.16
    19 PP_1631 conserved protein of unknown function no 0.16
    20 PP_4829 putative precorrin-3B synthase no 0.16

    Or look for negative cofitness